Deniz Gencaga

Complete Bibliography

Publications and Scholarly Outputs

Patents

  1. Fertilizer compositions and methods of making and using the same. United States Patent No: US 10,377,677 B2, 2019.
  2. Fertilizer compositions and methods of making and using the same. Also published in worldwide patent offices including AU, BR, CA, CN, EP, ES, HU, JP, MX, PL, RU, and UA, 2015–2023.

Books

  1. Transfer Entropy. Edited by Deniz Gencaga. MDPI Books, 2018. ISBN: 978-3-03842-919-7.

Book Chapters

  1. The Application of the R-Vine Copula and Different Regression Models in the Inference of Hodgkin-Huxley Data. Operations Research: Evolving Frontiers and Diverse Applications, CRC Press, 2025, pp. 232–249. DOI

Journal Articles

  1. Confounding Factor Analysis for Vocal Fold Oscillations. Entropy, 25(12), 1577, 2023. DOI
  2. Analysis of parameter changes of a neuronal network model using transfer entropy. International Advanced Researches and Engineering Journal, 22(3), 208–216, 2020. DOI
  3. Statistical Approaches for the Analysis of Dependency Among Neurons Under Noise. Entropy, 22(4), 387, 2020. DOI
  4. Effects of Neuronal Noise on Neural Communication. Proceedings, 20(4), 2, 2018.
  5. Transfer Entropy. Entropy, 33(1), 2, 2019.
  6. A Recipe for the Estimation of Information Flow in a Dynamical System. Entropy, 17(1), 438–470, 2015.
  7. Modeling non-Gaussian time-varying vector autoregressive processes by particle filtering. Multidimensional Systems and Signal Processing, 21(1), 73, 2010.
  8. Modeling of non-stationary autoregressive alpha-stable processes by particle filters. Digital Signal Processing, 18(3), 465–478, 2008.
  9. Estimation of time-varying AR SαS processes using Gibbs sampling. Signal Processing, 88(10), 2564–2572, 2008.

Conference Proceedings

  1. Formant manipulations in voice disguise by mimicry. IWBF, 2016. Best Paper Award.
  2. The relationship of voice onset time and voice offset time to physical age. ICASSP, 2016.
  3. Forensic anthropometry from voice: an articulatory-phonetic approach. MIPRO, 2016.
  4. Survey on the estimation of mutual information methods as a measure of dependency versus correlation analysis. AIP Conference Proceedings, 2014. DOI
  5. Towards identification of relevant variables in the observed aerosol optical depth bias between MODIS and AERONET observations. AIP Conference Proceedings, 2013. DOI
  6. Estimation and bias correction of aerosol abundance using data-driven machine learning and remote sensing. CIDU, 2012.
  7. Comparison of Information-Theoretic Methods to estimate the information flow in a dynamical system. NASA GISS Workshop, 2011.
  8. Characterization of Interstellar Organic Molecules. AIP Conference Proceedings, 2008. DOI
  9. Information-Theoretic Methods for Identifying Relationships among Climate Variables. NASA Earth-Sun Systems Technology Conference, 2008.
  10. Bayesian Separation of Non-Stationary Mixtures of Dependent Gaussian Sources. AIP Conference Proceedings, 2005. DOI
  11. Time-varying autoregressive parameter estimation of Cauchy processes by particle filters. IEEE SIU, 2005. Best Student Paper Award.
  12. On the performance comparison of gradient-type joint process estimators in adaptive signal processing. EUSIPCO, 2005.
  13. Synthetic aperture radar image enhancement using particle filters. ESA-EUSC, 2005.
  14. Estimation of time-varying autoregressive symmetric alpha stable processes by particle filters. EUSIPCO, 2005.
  15. Online Independent Component Analysis. SIU, 2003.
  16. Real-time Formant Frequency Estimator for Speech Signals. SIU, 2002.
  17. Adaptive Escalator Filter for Acoustic Echo Cancellation. SIU, 2002.
  18. Adaptive Escalator Filter for System Identification. SIU, 2002.

Technical Reports

  1. Estimation of Time-Varying Autoregressive Symmetric Alpha Stable Processes by Particle Filters. ISTI-CNR-2006-TR-45, Consiglio Nazionale delle Ricerche, 2006.

Published Abstracts

  1. Estimating Entropies and Mutual Information with Error Bars. 9th World Conference of the International Society for Bayesian Analysis, 2008.